Скачать с ютуб Metagenomic Sequence Classification using KRAKEN | Episode 1 | Metagenomics tutorial в хорошем качестве

Metagenomic Sequence Classification using KRAKEN | Episode 1 | Metagenomics tutorial

In this #metagenomics tutorial, you get to learn how to classify sequence reads using the tool kraken. Get the ebook and bash script here:   / metagenome-using-77590500   ________________________________ Download the codes and notebook here:  / python-for-77401668   ________________________________________________________________________________________________   / python-for-77401668   Support my work ________________________________________________________________________________________________ https://www.buymeacoffee.com/informat... https://www.paypal.com/paypalme/thein...   / bigdataanalytics   One-on-One coaching (Video Conferencing) ________________________________________________________________________________________________ https://calendly.com/bioinformaticscoach One-on-One coaching(Audio Call) ________________________________________________________________________________________________ https://clarity.fm/vincentappiah Get more bioinformatics tutorials on Patreon ________________________________________________________________________________________________   / bigdataanalytics   Subscribe to my channels ________________________________________________________________________________________________ Bioinformatics:    / @bioinformaticscoach   Data Science:    / @datasciencecoach   Short Clips:    / @bioinformaticscforbeginners   Reach out ________________________________________________________________________________________________ [email protected] Materials ______________________________________________________________________________________________ Original Tutorial can be found here https://ugene.net/metagenomic-classif... Dataset can be found here google drive:https://drive.google.com/drive/folder... Tools for this exercise Trimmomatic http://www.usadellab.org/cms/?page=tr... Kraken https://github.com/DerrickWood/kraken... Kraken database https://ccb.jhu.edu/software/kraken2/... https://benlangmead.github.io/aws-ind... Sequence adapter https://github.com/usadellab/Trimmoma... Kraken system requirement https://github.com/DerrickWood/kraken... How to install Kraken    • How I install metagenomics tools (KRA...   Chapters 00:00 Intro and PC Requirement 04:12 Install Tools 09:13 Download the kraken database 13:17 Download the sequence data 15:45 Download the adapter sequences 17:05 Trim the reads 26:17 Run the kraken command to classify the reads 30:52 Explore the output files 35:23 Interpret the results How I Classify Metagenomic Sequence Reads using KRAKEN | Episode 1 #bioinformatics #bioinformática #bioinformaticsforbeginners #genome #genomics #genomesequencing #datascience #metagenomics #linuxforbeginners