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This tutorial shows you how to visualize gene expression data by generating volcano plots using R Download the Rscript for this tutorial: / 75743948 Use Galaxy to generate Volcano Plots: • RNASeq Analysis on Galaxy Tutorials |... RNA Seq Analysis with DESEq2: • How I analyze RNA Seq Gene Expression... RNA Seq Analysis Tutorials: • RNA Seq Analysis Tutorials Get more bioinformatics tutorials on Patreon: / bigdataanalytics One-on-One coaching (Video Conferencing): https://calendly.com/bioinformaticscoach One-on-One coaching(Audio Call): https://clarity.fm/vincentappiah Support my work https://www.buymeacoffee.com/informat... https://www.paypal.com/paypalme/thein... / bigdataanalytics Subscribe to my channels Bioinformatics: / @bioinformaticscoach Data Science: / @datasciencecoach Short Clips: / @bioinformaticscforbeginners Reach out [email protected] Volcano Plots in R | Bioinformatics | Reproducing Galaxy Tutorials | Beginners| Getting Started Course Materials ________________________________________________________________________________________________ Download the data here: https://training.galaxyproject.org/tr... R Source Code https://biocorecrg.github.io/CRG_RInt... How to Install R ________________________________________________________________________________________________ How to install R and R packages using Anaconda • Install, Configure and Run R & R pack... How to Install R in Ubuntu • Install, Configure and Run R , Rstudi... Useful tutorials ________________________________________________________________________________________________ Gene Expression Analysis • How I analyze RNA Seq data using HISA... Chapters ________________________________________________________________________________________________ 00:00 Introduction 01:23 PC Requirement 01:34 Download the example data 04:19 Install packages 06:45 Open R studio 06:55 Set the working directory 07:54 Load the R packages 08:30 Load the data 12:34 Add a new column to label the gene expression status of the genes 21:55 Plot the volcano plot 26:21 Add horizontal and vertical lines to the plots 30:02 Highlight the top genes on the plot 31:22 Sort and select the top genes based on pvalues 35:08 Label the top genes in the dataframe 39:27 Generate the volcano plot and highlight the top genes R ggplot R volcano plot Opening Music Buddha by Kontekst / kontekstmusic Creative Commons — Attribution-ShareAlike 3.0 Unported — CC BY-SA 3.0 Free Download / Stream: http://bit.ly/2Pe7mBN Music promoted by Audio Library • Buddha – Kontekst (No Copyright Music) Volcano Plots with R ggplot | R for Bioinformatics | Reproducing Galaxy Tutorials #bioinformática #bioinformaticsforbeginners #bioinformatics #rprogrammingforbeginners #linuxforbeginners #linux #rna #rnaseq #datascience #datasciencecourse #datasciencetutorial ##bioinformática #genomics