Скачать с ютуб How to do single-cell RNA velocity analysis | Complete introduction в хорошем качестве

How to do single-cell RNA velocity analysis | Complete introduction

Complete introduction to single-cell RNA velocity using scVelo and velocyto. I explain what RNA velocity is and show you how to do single-cell RNA velocity analysis on your own data. I use velocyto and scVelo to calculate RNA velocity and project the velocity onto UMAPs. I also show how to find the gene velocities of given clusters or individual genes. References: http://velocyto.org/ https://scvelo.readthedocs.io/ Notebook: https://github.com/mousepixels/sanbom... 0:00 intro 0:20 What is RNA velocity 3:01 Installing velocyto 5:10 Counting spliced and unspliced RNA with Velocyto 9:00 Installing scVelo 10:00 Basic scVelo usage 21:13 Ideal RNA velocity example